# Nitrogen fixing prokaryotes in corals # M. Lesser, PI # Version 12 January 2018 ========================= Data_Link Dataset_Name Dataset_Description ------------------------- ________LSI.Mc.seqs_cleaned.fna________ Mcav microbiome 16S assembly Assembled reads for 16S pyrosequencing following quality filtering chimera removal and clustering at 97 percent similarity. ________Mcav_ITS2_Sanger.fasta_________ Symbiodinium ITS2 Sanger reads Sanger sequencing reads for 107 clones recovered from PCR amplification of ITS2 amplicons from Montastrea cavernosa samples. __metatranscriptome.fasta.dammit.fasta_ Metatranscriptome assembly filtered annotated Transcripts from Montastrea cavernosa metatranscriptome following assembly with Trinity/BinPacker/Tranfuse BLAST-filtering and annotation with Dammit. ____Symb_v1.0.0.fasta.dammit.fasta_____ Symbiodinium transcriptome filtered annotated Transcripts classified as Symbiodinium following holobiont transcriptome assembly with Trinity/BinPacker/Tranfuse BLAST-filtering and annotation with Dammit. __Montastrea_v1.0.2.fasta.dammit.fasta_ Mcav transcriptome assembly filtered annotated Transcripts classified as Montastrea cavernosa following holobiont transcriptome assembly with Trinity/BinPacker/Tranfuse BLAST-filtering and annotation with Dammit. _____Symb_v1.0.0.fasta.dammit.gff3_____ Symbiodinium transcript annotations GFF3 Annotation results for Symbiodinium transcripts output by Dammit __metatranscriptome.fasta.dammit.gff3__ Microbial transcript annotation GFF3 Annotation results for microbial transcripts output by Dammit Montastrea_v1.0.2.fasta.dammit.gff3.txt Montastrea cavernosa transcript annotations GFF3 Annotation results for coral transcripts output by Dammit ____symbB.v1.2.augustus.prot.fa.gz_____ RefSeq protein datasets corresponding to specific taxonomic groups RefSeq protein datasets corresponding to specific taxonomic groups defined as Plants Bacteria Archaea Fungi Protozoa and Invertebrates available from the NCBI as well as a Symbiodinium sp. proteome ______________PRJEB18062_______________ Illumina sequence reads for transcriptome of Montastraea cavernous Comparative Transcriptomics of the Coral Montastraea cavernosa From the Bahamas